Software & Downloads

Biblio-MetReS v.1 tool (no longer available, please use Biblio-MetReS v.2)

Biblio-MetReS v.1 analyzes scientific documents to automatically identifies interactions between genes/proteins in order to reconstruct molecular networks.


Biblo-MetReS Player tool (link)

Biblio-MetReS Player allows to visualize the graphical results of Biblio-MetReS without having to re-do the analysis.


CheNER tool (link)

CheNER is a system developed to annotate chemical compounds. This work was carried out in collaboration with Drs. Miguel Vazquez and Alfonso Valencia – from the Structural Computational Biology group at CNIO.


Biblio-MetReS v.2 tool (link)

Biblio-MetReS v.2 analyzes scientific documents to automatically identifies interactions between genes/proteins, biological processes/pathways and between both, genes and biological processes in order to reconstruct molecular networks.


CheNER v.2 tool (link)

CheNER is a system developed to annotate chemical compounds. This work was carried out during the participation in the IV BioCreAtIvE challenge.